CDS

Accession Number TCMCG007C41158
gbkey CDS
Protein Id XP_033130901.1
Location complement(join(1522779..1523099,1523395..1523463,1523548..1523628,1523734..1523826,1523931..1524020,1524096..1524161,1524249..1524300,1524465..1524650,1524738..1524857,1524942..1525279))
Gene LOC103839978
GeneID 103839978
Organism Brassica rapa

Protein

Length 471aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033275010.1
Definition tryptophan--tRNA ligase, cytoplasmic-like isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03664        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01867        [VIEW IN KEGG]
EC 6.1.1.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004830        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006436        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATAGAGACTATGGAAGAGAAGGCAATACAGGAGATCAAACAACTGTTACAACTTGTAGATCAGAAACTTAGCTCAATTCCTTCATCACCAATGAAACATGACCTCATACATGAGATCAAACAATGGTCTGATGAGAAAAAAGAGTCTGAATCGATGGAGCAAGTCGTGAATCCATATGAAGTATCAGCCAAAGACGGCGGTAAAATCGACTACGACAAGATTGTGGAAAAGTTTGGCTGCAAGAGAGTCGACCAGTCCCTGATCGATCGTGTTCATAGACTAACTTCTCGCGATCCGCACGTTTTCCTCCGCCGTGGCGTCTTCTTCGCACACAGGGATTTCAATGAGATTCTGGATTCATTCGAGAGAGGAGACAAGTTCTATCTCTACACAGGAAGAGGACCTTCATCAGAAGCTTTGCATCTAGGGCACTTGATACCTTTCATGTTTACCAAATACCTGCAAGAAGCTTTTAAGGTTCCTGTTGTTATACAGCTTACGGATGATGAAAAGTTCATGTGGAGTAAGACCTTAAAAGTGGAGGATACTAAAAGACTTGCCAGGGAAAATATCAAAGATATAATTGCTTGCGGATTTGATGTAGAAAAGACATTTATTTTCTCGAACATCGAGCATGCTGGTACATTCTATGAAAATACGTTGAAGATTGGAAAGTGCGTAACAGTTAATAAGGCTAACGCAATCTTTGGCTTTGCTGGCGAAGATCCTGTTGGAAAAATGGGTTTCCCTCCTGTGCAGGCAGCTCCATCTTTTGCTAGCTCGTTCCAACACTTGTTCCTTGGAAAGGACAATAATCTCCGTTGCTTGATTCCTTGTGCTATTGACCAAGATCCATATTTTCGAATGACTCGAGATGTTGCACCTCGGTTAGATTATAGCAAGCCTGCTCTAATTGAGTCAAAATTCTTGCCTTCTCTGAAGGGAGTGAACGGAAAAATGTCGGCGAGTAATCCTAACTCAGCCATATACGTAACGGATACCACCAAGGACATTAAGAAAAAGGTTAACAGTGCGTTTAGTGGTGGGAAAGACAACTCAACGGAACAAGAAAATGCTGGAGCAGATCTGGAGGTAGACATACCGTTCAAGTACTTGAGTTTCTTCCTAGATGATGATGCTGAACTTGAACACATAAAGAAGGTAGATTACATTACCCTCGCCTCTCTAGCTCTTGTTTTTAGCTCATTACACAGAACAAAGAATGTTCATCTCTGTCTTAATGTGTTTCAGGAATATGGAGAAGGAAGAATGCTATCTGGACCGGTTAAGCAACGACTCACTGAAGTTTTGACAGAAGTAGTTGAGAAACACCGCAAGGCTCGAGCTGCTGTTACTGATGAAATGGTGAACGCGTTTATGGCCGTGAGACCTCTACCAAAGATGTTCGACTAG
Protein:  
MIETMEEKAIQEIKQLLQLVDQKLSSIPSSPMKHDLIHEIKQWSDEKKESESMEQVVNPYEVSAKDGGKIDYDKIVEKFGCKRVDQSLIDRVHRLTSRDPHVFLRRGVFFAHRDFNEILDSFERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPVVIQLTDDEKFMWSKTLKVEDTKRLARENIKDIIACGFDVEKTFIFSNIEHAGTFYENTLKIGKCVTVNKANAIFGFAGEDPVGKMGFPPVQAAPSFASSFQHLFLGKDNNLRCLIPCAIDQDPYFRMTRDVAPRLDYSKPALIESKFLPSLKGVNGKMSASNPNSAIYVTDTTKDIKKKVNSAFSGGKDNSTEQENAGADLEVDIPFKYLSFFLDDDAELEHIKKVDYITLASLALVFSSLHRTKNVHLCLNVFQEYGEGRMLSGPVKQRLTEVLTEVVEKHRKARAAVTDEMVNAFMAVRPLPKMFD